BALL

Rapid Software Prototyping can significantly reduce development times in the field of Computational Molecular Biology and Molecular Modeling. BALL (Biochemical ALgorithms Library) is an application fr...
Language(s): C++, Python
Operating system(s): Linux, Unix, Mac OS, Windows
License: GNU Lesser General Public License

JOELib

JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to...
Language(s): Java
Operating system(s): Windows, Unix, Linux, Mac OS
License: General Public License 2.0

Jmol

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry, biochemistry, physics, and materials science. It is cross-platform, running on Windows, Mac OS X, and...
Language(s): Java
Operating system(s): Linux, Mac OS, Unix, Windows
License: GNU Lesser General Public License 2.0

Molekel

Molekel is an open-source multi-platform molecular visualization program. Multiplatform: Mac OS X, Windows, Linux Different methods to speed-up rendering of molecules with support for billboards a...
Language(s): N/A
Operating system(s): Linux, Microsoft Windows, Mac OS X
License: GNU General Public License

Open Babel

Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular mo...
Language(s): C++
Operating system(s): Windows, Mac OS, Linux, Android
License: General Public License 2.0